PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peinf101Scf02666g00014.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia; Petunia integrifolia
Family bHLH
Protein Properties Length: 423aa    MW: 46281 Da    PI: 5.5308
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peinf101Scf02666g00014.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.20.000693844053455
                               TTS-STCHHHHHHHHHHHHHHH CS
                       HLH  34 pskKlsKaeiLekAveYIksLq 55 
                                 +  + a++L  Av+YIk+L+
  Peinf101Scf02666g00014.1 384 AERQTNTADMLDFAVDYIKELE 405
                               344599*************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.107.3E-7362420IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.63E-5362419IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    Send to blast
MDQSRFQQQP MTSGLTRYRS APSSYFSSLL SNNPTSASGG SASGIISGGC GYARDDFMQN  60
SNNSSSDIEQ VFARFVASID NRDSNSGSLV SNQQNLENPS NMNVRSDFIV PKQEVKLSRQ  120
PLARQRSCDY SLVSQMNYES QVKRSKFVSS VKQEPRETLQ QLQQQPQQQS TDQQIDTSVV  180
DNSFVFTSSM NSARLTPVSI GGGGAGSGNS NLARYNSSPA GFFAQINIEN EYGIRGTGSY  240
GTGTSARTEA SLSTPRRTQV GFSTGKPPAS PGLMPPISEI GDKGVEESST SNERKNDESC  300
ITDTDFPMPS WEDSHILSDD FLKAEDIEIE PFSNQNNEGL ARPPLPLAHH MSLPTSTMEK  360
LLQDSVPLNV RAKRGCATHP RSIAERQTNT ADMLDFAVDY IKELEKQVKI LAERRAKCTC  420
TNK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9755232e-48HG975523.1 Solanum lycopersicum chromosome ch11, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006364245.10.0PREDICTED: transcription factor bHLH122-like
TrEMBLA0A0V0IJ500.0A0A0V0IJ50_SOLCH; Putative transcription factor bHLH-like
STRINGPGSC0003DMT4000567160.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA46052239
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51140.14e-37bHLH family protein